Equipment

Instruments & Workstations

Microscopy systems, environmental controls, and image analysis workstations available to all UW researchers

Microscopy platforms

Four complementary imaging systems covering confocal, widefield, and live-cell applications. All require advance reservation and completed training.

Zeiss LSM 880 Confocal — 32-channel spectral detection
Confocal — Zeiss LSM 880

7 laser lines. 32-channel GaAsP Airyscan detector, 32-channel QUASAR spectral detector. Fixed and live-cell imaging.

Leica SP8X Confocal — 4-channel fluorescence imaging
Confocal — Leica SP8X

White light laser (470–670 nm), resonant scanner, HyD detectors, Lightning deconvolution. NIH-funded via S10 OD016240.

Leica Inverted Widefield — neuron imaging
Leica Inverted Widefield

Motorized stage for mosaic tiling, DIC optics, full fluorescence filter sets. Ideal for large-area and multi-point experiments.

IMARIS 3D image analysis workstation
IMARIS Workstation

Full-license 3D/4D suite on AMD Threadripper — surface rendering, spot detection, filament tracing, cell analysis. Free for UW students.

Live-cell timelapse — cell division
Environmental Control

Pecon stage-top incubator and Warner 35 mm dish incubator. Temperature, CO₂, and humidity control for live-cell experiments.

Zeiss LSM 880 — detailed specs

Zeiss LSM 880 Confocal Microscope
Laser sources
  • 405 nm, 440 nm diode laser
  • 458 nm, 488 nm, 514 nm Argon laser
  • 561 nm DPSS laser
  • 633 nm HeNe laser
Scanning & detection
  • 32-channel GaAsP spectral detector for simultaneous spectral imaging
  • 2× PMT detectors for standard fluorescence channels
  • Airyscan detector — 1.7× resolution improvement over diffraction limit
  • Bi-directional scanning up to 8 fps at 512×512
  • Transmitted light detector for DIC/brightfield
Airyscan super-resolution
  • ~140 nm lateral resolution, ~400 nm axial resolution
  • Improved signal-to-noise ratio compared to conventional confocal
  • Compatible with all laser lines and standard fluorophores
Software & analysis
  • ZEN Black — acquisition, processing, and analysis
  • Spectral unmixing for multi-fluorophore experiments
  • FRAP, FRET, and time-series modules
  • 3D rendering and orthogonal projection
Objectives available
  • 10×/0.45 air — large field of view, tissue sections
  • 20×/0.80 air — standard fluorescence
  • 40×/1.30 oil — high-resolution subcellular
  • 63×/1.40 oil — fine subcellular detail, Airyscan super-resolution
  • 100×/1.45 oil — maximum resolution, single-molecule imaging
Book the LSM 880 Contact for questions